Peptide-HLA class I supertype binding prediction



Fast peptide nevigation according to numbers of predicted binders to HLA supertype representatives:

The HLA binder peptide is defined based on predcition results conducted by NetMHC 4.0, where the peptide has been classified as a weak binder (the predicted Rank of Binding Level between 0.5% to 2%) or strong binder (the predicted Rank of Binding Level is equal to or lower than 0.5%).


    Virus: SARS-CoV-2


        Experiment: SARS-CoV-2_synthetic; EXP_001
#Peptides binding to 1 HLA supertype: 3351;

#Peptides binding to 2 HLA supertype: 907;

#Peptides binding to 3 HLA supertype: 218;

#Peptides binding to 4 HLA supertype: 68;

#Peptides binding to 5 HLA supertype: 11;

#Peptides binding to 6 HLA supertype: 7;

#Peptides binding to 7 HLA supertype: 2;

HLA-A0101: WBs - 729
; SBs - 307
;
HLA-A0201: WBs - 339
; SBs - 109
;
HLA-A0301: WBs - 597
; SBs - 199
;
HLA-A2402: WBs - 498
; SBs - 149
;
HLA-A2601: WBs - 497
; SBs - 190
;
HLA-B0702: WBs - 238
; SBs - 48
;
HLA-B0801: WBs - 251
; SBs - 111
;
HLA-B1501: WBs - 327
; SBs - 124
;
HLA-B2705: WBs - 153
; SBs - 43
;
HLA-B3901: WBs - 323
; SBs - 78
;
HLA-B4001: WBs - 361
; SBs - 83
;
HLA-B5801: WBs - 353
; SBs - 93
;


        Experiment: SARS-CoV-2_FUSION; EXP_002
#Peptides binding to 1 HLA supertype: 4049;

#Peptides binding to 2 HLA supertype: 1129;

#Peptides binding to 3 HLA supertype: 267;

#Peptides binding to 4 HLA supertype: 87;

#Peptides binding to 5 HLA supertype: 6;

#Peptides binding to 6 HLA supertype: 6;

HLA-A0101: WBs - 896
; SBs - 386
;
HLA-A0201: WBs - 384
; SBs - 92
;
HLA-A0301: WBs - 743
; SBs - 262
;
HLA-A2402: WBs - 651
; SBs - 175
;
HLA-A2601: WBs - 628
; SBs - 208
;
HLA-B0702: WBs - 292
; SBs - 60
;
HLA-B0801: WBs - 352
; SBs - 159
;
HLA-B1501: WBs - 387
; SBs - 136
;
HLA-B2705: WBs - 227
; SBs - 69
;
HLA-B3901: WBs - 353
; SBs - 75
;
HLA-B4001: WBs - 438
; SBs - 85
;
HLA-B5801: WBs - 364
; SBs - 100
;


        Experiment: SARS-CoV-2; EXP_003
#Peptides binding to 1 HLA supertype: 26;

#Peptides binding to 2 HLA supertype: 10;

#Peptides binding to 3 HLA supertype: 1;

HLA-A0101: WBs - 6
; SBs - 7
;
HLA-A0201: WBs - 9
; SBs - 2
;
HLA-A0301: WBs - 2
; SBs - 1
;
HLA-A2402: WBs - 2
; SBs - 1
;
HLA-A2601: WBs - 3
; SBs - 1
;
HLA-B0702: WBs - 2
; SBs - 1
;
HLA-B0801: WBs - 1
; SBs - 2
;
HLA-B1501: WBs - 0
; SBs - 1
;
HLA-B2705: WBs - 0
; SBs - 0
;
HLA-B3901: WBs - 5
; SBs - 0
;
HLA-B4001: WBs - 0
; SBs - 0
;
HLA-B5801: WBs - 1
; SBs - 2
;


        Proteome-wide HLA binding prediction of using the proteome data of Human SARS coronavirus and Severe acute respiratory syndrome coronavirus 2


        The predicted binding peptides are derived from the combination of the protein seqeunce data of Human SARS coronavirus and Severe acute respiratory syndrome coronavirus 2. Download the whole proteome HLA binding predictions here.