Detailed peptide information

Sequence:

WTFGAGAA

Length:

Virus:

Severe acute respiratory syndrome coronavirus 2;Human SARS coronavirus

IEDB reference:

IEDB acc.	Protein name	Species
Not Found or Not Applicable.

Source Protein(s):

java.io.FileNotFoundException: /var/lib/tomcat9/webapps/ROOT/data/uniprot_sprot_reformatted.fasta (No such file or directory) P0DTC2
    Protein name: Spike glycoprotein
    Gene name: S
    Species: Severe acute respiratory syndrome coronavirus 2

java.io.FileNotFoundException: /var/lib/tomcat9/webapps/ROOT/data/uniprot_sprot_reformatted.fasta (No such file or directory) P59594
    Protein name: Spike glycoprotein
    Gene name: S
    Species: Human SARS coronavirus

Mass:

779.3602

ppm:

-2.6

m/z:

780.3683

Retention time:

31.82

Normalized retention time:

50.5519

-10logP:

82.82

Digestion evidence:
Server: Protein Digest

Enzyme	Source Protein	Species
Not Found or Not Applicable.

Modification:

Residue	Position	Modification type	Mass change
No modification found

HLA binding

Predicted by NetMHC 4.0 (Andreatta, M. and Nielsen, M., Bioinformatics, 2016). A strong binder is to a specific HLA allele is defined when the predicted Rank of Binding Level is euqal to or lower than 0.5%; while a weak binding to a specific HLA allele has a predicted Rank of Binding Level between 0.5% to 2%.


Average rank (%): 27.149; Number of predicted binders: 0

Binder Type	HLA Allele	Prediction Ranking (%)
The peptide has not been predicted as a binder to any HLA supertype.

virusMS

WTFGAGAA